BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B12LP1|AL425651
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1720 1592 0.0
>3x_Contig1720
Length = 19870
Score = 1592 bits (803), Expect = 0.0
Identities = 803/803 (100%)
Strand = Plus / Plus
Query: 1 gatccttgaactggtatgataagatttcatagactatctctgaaggtaaccgcatcgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16752 gatccttgaactggtatgataagatttcatagactatctctgaaggtaaccgcatcgtcg 16811
Query: 61 atgtttcactgatcatattgaacgaattatgatatgcgagccccgaataacacgttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16812 atgtttcactgatcatattgaacgaattatgatatgcgagccccgaataacacgttttat 16871
Query: 121 acacttcaccaatccttaaagctatttgcacctgttttggtgctcttgatgatttcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16872 acacttcaccaatccttaaagctatttgcacctgttttggtgctcttgatgatttcttta 16931
Query: 181 agatccactttggttttcattttttcttctattgatgcgggtcttttgttcaagttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16932 agatccactttggttttcattttttcttctattgatgcgggtcttttgttcaagttcttg 16991
Query: 241 ttcattctaattatatcgctactttatttttcatttcagggcataaagtacacttaaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16992 ttcattctaattatatcgctactttatttttcatttcagggcataaagtacacttaaggt 17051
Query: 301 tcataagggatcaaagagtatgaaaaacgtgatgtggttattcgtagctttacttagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17052 tcataagggatcaaagagtatgaaaaacgtgatgtggttattcgtagctttacttagtta 17111
Query: 361 tgtaattaactatatgattgtctaatatgagtatgagaattcttgtattacttttcctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17112 tgtaattaactatatgattgtctaatatgagtatgagaattcttgtattacttttcctca 17171
Query: 421 atttgacagactaggcgtcctaatgagaagtacccatgaaacgtaaaatccttgagtctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17172 atttgacagactaggcgtcctaatgagaagtacccatgaaacgtaaaatccttgagtctc 17231
Query: 481 agtacattcattcaaagactatgcggatagtttttttttagttcatagaatatcgaacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17232 agtacattcattcaaagactatgcggatagtttttttttagttcatagaatatcgaacat 17291
Query: 541 atcaatttagaggcttcataacttcaccataaagcatctttttcaacagttccagtggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17292 atcaatttagaggcttcataacttcaccataaagcatctttttcaacagttccagtggaa 17351
Query: 601 tatcgtcttcctcgtttttatcgcgggcctcgttgtcaattttccaaaaattgtcttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17352 tatcgtcttcctcgtttttatcgcgggcctcgttgtcaattttccaaaaattgtcttcaa 17411
Query: 661 ggtttagttggggataatctggctcgtcatctggatcatgatatgttgccaaatatggat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17412 ggtttagttggggataatctggctcgtcatctggatcatgatatgttgccaaatatggat 17471
Query: 721 gttccaacgcttcaactgcactgatcctcttgtctgggttgaaagttagcatcttggaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17472 gttccaacgcttcaactgcactgatcctcttgtctgggttgaaagttagcatcttggaca 17531
Query: 781 ataaatcgatagcaagagggtta 803
|||||||||||||||||||||||
Sbjct: 17532 ataaatcgatagcaagagggtta 17554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6939
Number of Sequences: 1807
Number of extensions: 6939
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)